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I've created the Google Schema code for an organisation. Should this go in the template HTML so it would be shown on all pages or just on the home page?

I've justed signed up for SEOMOZ and testing out the ranking report software. For a client that I'm doing an audit for I've ran a ranking report against the keywords.

Using Chrome Incognito I've checked the ranking and they are on the 1st page but the ranking report is showing they aren't in the top 43, any ideas why this might be?

I've checked my setting and set up and that's all fine.