OK, I figured out how to add a canonical link to the magento login page. I put this in my local.xml file (/app/design/frontend/<designpackage>/<theme>/layout/local.xml) : </theme></designpackage>
<customer_account_login><reference name="head"><action method="addLinkRel"><rel>canonical</rel><href>http://www.site.com/customer/account/login/</href></action></reference></customer_account_login>
As for whether or not this will get rid of the crawl errors, I won't know until Roger tries again, will report back later.