Oh, got it - so this is a standard 301-redirect scenario, but Google just isn't honoring it for some reason. That's unusual, certainly. Have you checked the headers? I use the SEOBook tool, for example?
http://tools.seobook.com/server-header-checker/
I don't mean this to be in any way condescending, but I always double-check them, across a variety of URLs. You have to make sure that the redirects are working the way you think they're working (and aren't chained to other redirects, etc.).
Did you redirect page-by-page, in the sense that every old URL has a new URL? Sometimes, the home-page or main-page redirects work, but deeper redirects fail (due to minor changes or incomplete .htaccess code).
Did anything else happen during the change? Did you change the URL structure, design, etc.?
Did the "new" (to you) domain have any existing history? Is it possible you inherited a problem, like bad links or a bad history?